On a VM installed from the live installer, I ran update-initramfs -u after the install and initial reboot. Then I rebooted again, whereupon I was prompted for my disk encryption password a second time (for the other luks partition) after I had already entered it successfully.
As you can see from the screenshot, it even says that cryptsetup says it was set up successfully for one partition but yet I need to enter the password again for the second partition. I believe the password should only be applied to one partition, thus being prompted only once to unencrypt.
Additional reboots have the same behavior, being prompted to unencrypt both partitions.
Behavior seen with https://downloads.puri.sm/live/gnome/2018-08-26/pureos-8.0-gnome-live_20180826-amd64.hybrid.iso